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Drug-combination-synergy
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35 Commits (7ae5c9d6658b62e3a84eaeeb92322f076ad3411f)
 

Author SHA1 Message Date
  MahsaYazdani 7ae5c9d665 reduce epoch time by loading file outside of the function call 1 year ago
  MahsaYazdani 1f6e67e818 reduce making fastsynergydataset time 1 year ago
  MahsaYazdani 3f1c3f94d9 add ddi_graph to eval_model 1 year ago
  MahsaYazdani 7ed13bfd09 resolve all bugs related to DDI graph (batched) 1 year ago
  MahsaYazdani 3472adab5f resolve NeighborLoader exit with no error message 1 year ago
  MahsaYazdani 59896011a9 solve merging the models 1 year ago
  MahsaYazdani ad923450e8 Solve big graph problem 1 year ago
  rezav 78806ea617 Merge remote-tracking branch 'origin/main' 2 years ago
  rezav 35f675ca33 fix tensor indices bug 2 years ago
  Mahsa Yazdani 19efc41fde
Merge pull request #1 from mahsayazdani/gpu-specific 2 years ago
  MahsaYazdani 90125371ad transfer DDIInteractionDataset's data to gpu if available 2 years ago
  Mahsa Yazdani d3fc63e5f3
Update .gitignore 2 years ago
  MahsaYazdani b83d9758f4 change moving to cudo method 2 years ago
  MahsaYazdani 59f597e94a add gc for clearing gpu cache 2 years ago
  rezav 4f9e483f81 memory ): 2 years ago
  rezav ac300c51dc path small change 2 years ago
  rezav 8b3ef6ccb6 path small change 2 years ago
  rezav d45041837c -1 indices solved and DTI added 2 years ago
  rezav 519a0efb36 some model bugs fixed 2 years ago
  MahsaYazdani ef6cb9f74d integrate different parts for the first run 2 years ago
  Mahsa Yazdani f5b5a3c183
Delete Drug directory with uppercase name 2 years ago
  MahsaYazdani 2408b8f25e rename Drug folder to drug 2 years ago
  MahsaYazdani 6c87ebe4fd add some minor changes 2 years ago
  MahsaYazdani ea3a08c09d add provided cell features and cell2ids 2 years ago
  MahsaYazdani 855c4b8faf add base utils for predictor 2 years ago
  MahsaYazdani 8f53af3ca6 add predictor base codes 2 years ago
  MahsaYazdani 95aa454131 rename drug folder names 2 years ago
  MahsaYazdani 8ab2237e81 integrate drug static features into DDIInteractionDataset and some other minor changes 2 years ago
  MahsaYazdani a6f8e419b9 add drug static features and some minor changes 2 years ago
  MahsaYazdani d72ad6676c add morgan fp extractor and smiles extractor from PubChem 2 years ago
  MahsaYazdani 4a9f178e48 initial commit of the preprocessed items 2 years ago
  MahsaYazdani ade0e457ad add main notebook 2 years ago
  Mahsa Yazdani 8115131460
Update README.md 2 years ago
  Mahsa Yazdani 08c836de1f
Update README.md 2 years ago
  Mahsa Yazdani 93c16130e7
Initial commit 2 years ago