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Drug-combination-synergy
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  • e0b76a7 (main) add readme.md file with images by MahsaYazdani 2025-05-18 21:30:23 +0330
  • 136ef63 add all project files by MahsaYazdani 2025-05-18 17:00:26 +0330
  • 428d5f8 improve speed (middle of the work) by MahsaYazdani 2023-10-22 12:24:36 +0330
  • 7ae5c9d reduce epoch time by loading file outside of the function call by MahsaYazdani 2023-09-07 20:55:39 +0330
  • 1f6e67e reduce making fastsynergydataset time by MahsaYazdani 2023-09-04 16:17:04 +0330
  • 3f1c3f9 add ddi_graph to eval_model by MahsaYazdani 2023-09-04 14:41:48 +0330
  • 7ed13bf resolve all bugs related to DDI graph (batched) by MahsaYazdani 2023-09-02 00:01:01 +0330
  • 3472ada resolve NeighborLoader exit with no error message by MahsaYazdani 2023-08-19 15:25:36 +0330
  • 5989601 solve merging the models by MahsaYazdani 2023-08-06 17:12:50 +0330
  • ad92345 Solve big graph problem by MahsaYazdani 2023-08-06 17:03:52 +0330
  • 78806ea Merge remote-tracking branch 'origin/main' by rezav 2023-06-27 03:24:40 +0330
  • 35f675c fix tensor indices bug by rezav 2023-06-27 03:22:24 +0330
  • 19efc41 Merge pull request #1 from mahsayazdani/gpu-specific by Mahsa Yazdani 2023-06-21 13:16:11 +0330
  • 9012537 transfer DDIInteractionDataset's data to gpu if available by MahsaYazdani 2023-06-21 12:53:46 +0330
  • d3fc63e Update .gitignore by Mahsa Yazdani 2023-06-20 17:33:19 +0330
  • b83d975 change moving to cudo method by MahsaYazdani 2023-06-20 17:28:38 +0330
  • 59f597e add gc for clearing gpu cache by MahsaYazdani 2023-06-18 13:25:35 +0330
  • 4f9e483 memory ): by rezav 2023-06-09 22:44:29 +0330
  • ac300c5 path small change by rezav 2023-06-09 18:53:32 +0330
  • 8b3ef6c path small change by rezav 2023-06-09 18:29:28 +0330
  • d450418 -1 indices solved and DTI added by rezav 2023-06-02 21:39:20 +0330
  • 519a0ef some model bugs fixed by rezav 2023-05-29 07:38:16 +0330
  • ef6cb9f integrate different parts for the first run by MahsaYazdani 2023-05-27 18:44:35 +0330
  • f5b5a3c Delete Drug directory with uppercase name by Mahsa Yazdani 2023-05-25 12:26:08 +0330
  • 2408b8f rename Drug folder to drug by MahsaYazdani 2023-05-25 12:21:34 +0330
  • 6c87ebe add some minor changes by MahsaYazdani 2023-05-20 12:43:55 +0330
  • ea3a08c add provided cell features and cell2ids by MahsaYazdani 2023-05-20 11:28:06 +0330
  • 855c4b8 add base utils for predictor by MahsaYazdani 2023-05-20 11:23:04 +0330
  • 8f53af3 add predictor base codes by MahsaYazdani 2023-05-20 11:21:20 +0330
  • 95aa454 rename drug folder names by MahsaYazdani 2023-05-20 08:51:00 +0330
  • 8ab2237 integrate drug static features into DDIInteractionDataset and some other minor changes by MahsaYazdani 2023-05-19 15:18:37 +0330
  • a6f8e41 add drug static features and some minor changes by MahsaYazdani 2023-05-17 16:32:32 +0430
  • d72ad66 add morgan fp extractor and smiles extractor from PubChem by MahsaYazdani 2023-04-23 23:02:31 +0430
  • 4a9f178 initial commit of the preprocessed items by MahsaYazdani 2023-04-23 20:43:21 +0430
  • ade0e45 add main notebook by MahsaYazdani 2022-09-06 15:05:32 +0430
  • 8115131 Update README.md by Mahsa Yazdani 2022-09-06 14:50:15 +0430
  • 08c836d Update README.md by Mahsa Yazdani 2022-09-06 14:50:00 +0430
  • 93c1613 Initial commit by Mahsa Yazdani 2022-09-06 14:49:28 +0430