DeepTraCDR/Scenario2/new/new_model.py

from model import DeepTraCDR, ModelOptimizer
from data_sampler import NewSampler
import torch
def run_DeepTraCDR(cell_exprs, drug_finger, res_mat, null_mask, target_dim, target_index,
               evaluate_fun, args):

        # Convert to numpy if needed
    if isinstance(res_mat, torch.Tensor):
        res_mat = res_mat.numpy()
    if isinstance(null_mask, torch.Tensor):
        null_mask = null_mask.numpy()
    # Initialize sampler with required parameters
    sampler = NewSampler(res_mat, null_mask, target_dim, target_index)
    
    # Initialize model with correct device parameter name
    model = DeepTraCDR(
        adj_mat=sampler.train_data,
        cell_exprs=cell_exprs,
        drug_fingerprints=drug_finger,
        layer_size=args.layer_size,
        gamma=args.gamma,
        device=args.device  
    )
    
    # Initialize optimizer with correct parameter order
    opt = ModelOptimizer(
        model=model,
        train_data=sampler.train_data,
        test_data=sampler.test_data,
        test_mask=sampler.test_mask,
        train_mask=sampler.train_mask,
        adj_matrix=res_mat,  
        evaluate_fun=evaluate_fun,
        lr=args.lr,
        wd=args.wd,
        epochs=args.epochs,
        test_freq=args.test_freq if hasattr(args, 'test_freq') else 20,
        device=args.device
    )
    
    # Call train method and unpack results
    results = opt.train()
    
    return results[0], results[1] # true_data, predict_data, auc_data